Polysaccharide Class

Dermatan sulfate

Sulfated linear anionic glycosaminoglycan species

Identifiers & Class

SNFG Chemical Structure
Abbreviation Dermatan sulfate
ChEBI ID 58465
GlyTouCan ID G20291UE
KEGG ID C20908

GlycoCT Sequence Block

CT Format

Unique sequence block representation for structural databases:

RES 1b:b-dgal-HEX-1:5 2s:n-acetyl 3b:a-lido-HEX-1:5|6:a 4s:sulfate LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:1o(4+1)4n

Dataset Coverage Info

Protocol Lengths Status
All-Atom MD dp2, dp4, dp6 Available
RS-REMD dp16 Available
Coarse-Grained MD dp6, dp16 Not Available

*Coarse-grained coverage is not available for this GAG. Current CG simulation models are heparin-specific due to SUGRES force-field constraints.

Related Complexes

Complex Identifier/Name Cathepsin Target No. of binding poses Actions
CATO202 — Cathepsin O - DS, dp2 Cathepsin O (dp2) 3 View Record
CATO204 — Cathepsin O - DS, dp4 Cathepsin O (dp4) 3 View Record
CATO206 — Cathepsin O - DS, dp6 Cathepsin O (dp6) 2 View Record
CATX202 — Cathepsin X - DS, dp2 Cathepsin X (dp2) 3 View Record
CATX204 — Cathepsin X - DS, dp4 Cathepsin X (dp4) 1 View Record
CATX206 — Cathepsin X - DS, dp6 Cathepsin X (dp6) 2 View Record
CATF202 — Cathepsin F - DS, dp2 Cathepsin F (dp2) 3 View Record
CATH202 — Cathepsin H - DS, dp2 Cathepsin H (dp2) 3 View Record
CATH204 — Cathepsin H - DS, dp4 Cathepsin H (dp4) 3 View Record
CATH206 — Cathepsin H - DS, dp6 Cathepsin H (dp6) 3 View Record
CATH104 — Cathepsin H - CS6, dp4 Cathepsin H (dp4) 3 View Record
CATH106 — Cathepsin H - CS6, dp6 Cathepsin H (dp6) 3 View Record
CATW202 — Cathepsin W - DS, dp2 Cathepsin W (dp2) 3 View Record
CATW204 — Cathepsin W - DS, dp4 Cathepsin W (dp4) 3 View Record
CATW206 — Cathepsin W - DS, dp6 Cathepsin W (dp6) 3 View Record
CATK206 — Cathepsin K - DS, dp6 Cathepsin K (dp6) 3 View Record
CATB202 — Cathepsin B - DS, dp2 Cathepsin B (dp2) 3 View Record
CATL202 — Cathepsin L - DS, dp2 Cathepsin L (dp2) 3 View Record
CATL204 — Cathepsin L - DS, dp4 Cathepsin L (dp4) 3 View Record
CATL206 — Cathepsin L - DS, dp6 Cathepsin L (dp6) 3 View Record
CATK202 — Cathepsin K - DS, dp2 Cathepsin K (dp2) 3 View Record
CATK204 — Cathepsin K - DS, dp4 Cathepsin K (dp4) 3 View Record
CATV204 — Cathepsin V - DS, dp4 Cathepsin V (dp4) 3 View Record
CATV206 — Cathepsin V - DS, dp6 Cathepsin V (dp6) 3 View Record
CATS202 — Cathepsin S - DS, dp2 Cathepsin S (dp2) 3 View Record
CATS204 — Cathepsin S - DS, dp4 Cathepsin S (dp4) 3 View Record
CATS206 — Cathepsin S - DS, dp6 Cathepsin S (dp6) 3 View Record