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Complex Record

Cathepsin B - CS4, dp2

Clustering density analysis & representative configuration

Complex ID CATB002
Cathepsin Target Cathepsin B
Glycosaminoglycan Chondroitin 4-sulfate
Total Clusters 3

Clustering density

Cluster overview image not available.

DBSCAN clustering results showing the positional density of GAG ligands on the protease.

Representative population

Cluster 1 Population: 19 structures
Cluster 2 Population: 16 structures
Cluster 3 Population: 5 structures

Binding Poses: these clusters correspond directly to different localized binding poses on the cathepsin surface.

Structural clusters

CATB002-1

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.

CATB002-2

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.

CATB002-3

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.